List of Publications

M. Reinhardt, G. Tkačik, and P. R. ten Wolde, Path Weight Sampling: Exact Monte Carlo Computation of the Mutual Information between Stochastic Trajectories, Physical Review X 13, 041017 (2023).
A. Tjalma1, M. Reinhardt2, A.-L. Moor, and P. R. ten Wolde, Mutual Information Rate—Linear Noise Approximation and Exact Computation, in preparation.
M. Reinhardt, G. Tkačik, and P. R. ten Wolde, ML-PWS: Computing the Mutual Information between Stochastic Trajectories using Neural Networks, in preparation
3A.-L. Moor, A. Tjalma, M. Reinhardt, P. R. ten Wolde, and C. Zechner, State- versus Reaction-Based Information Processing in Biochemical Networks, arXiv preprint arXiv:2505.13373 (2025).

  1. These authors contributed equally.↩︎

  2. These authors contributed equally.↩︎

  3. Publication not appearing in this thesis.↩︎